Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858804.1_cds_XP_016514095.1_26578
CDS Infomation

[gene=LOC107830922] [db_xref=GeneID:107830922] [protein=TOM1-like protein 2 isoform X1] [protein_id=XP_016514095.1] [location=join(77630..77730,78699..78777,78930..79028,79154..79267,84701..84858,86072..86147,86349..86381,86775..86860,95889..96050,96219..96546)] [gbkey=CDS]
Sequence

ATGGCAGCAGAGCTTGTTAATTCTGCAACAAGTGACAAACTCACTGAAATAGATTGGACA
AAAAATATTGAAATATGTGAATTGGTTGCACATGATCACAAGCAAGCCAGAGATGTCGTT
AAAGCTATAAAGAAACGGCTGGGAAGCAAAAGCCCAAACTCACAACTCTTCTCAGTAAAT
TTGCTGGAAATGTTGATAAACAATATCGGAGAACCTGTTCATAAGCAGGTTATTGATACA
GGAATCCTTCCGGTACTTGTGAAGATAGTAAAGAAAAAGTCAGATCTACCTGTAAGAGAA
AAGATATTTCTTCTTCTGGATGCTGCACAGACTTCTCTTGGCGGAGCTTCTGGGAGGTTC
CCTCAGTATTATTCTGCATATTATGAGTTAGTGAGTGCAGGCGTGCAGTTTCCTCAAAGA
CCTCTCGTCTCCTCCGAACTGCATGCTCCCTCAAATGAGAATAAACATAATCAACGAAAC
AATGATCATGTCTCTTCTAGATGTGAAATAAAATTCCCACAAGCAGAGCCTAAAAAATTT
CCTGACAACAGTATCCTACAGAAGGCTGCCGCTGCCCTAGAGGTTCTAAGGGAAGTTCTT
GATGCCGTCAACACTCAGCATCCTGAGGCAATTTTGTTCGATTTGCTCTTCATTCAAGAG
GGAGCAAAGGATGAGTTCACACTCGATCTTGTGGAGCAATGTTCGTTTCAAAAGCAACGT
GTGATGCATCTTGCTATAAGTTCTCGGGATGAAAAGGTGGTCTCCCAAGCAGTGGAGCTG
AACGAGAAGCTTGATAGAGTTCTCAAAAGACATGAAGCACTTCTTTCTGCTTGGCCAACC
TCCACATCAAATCCACATGATCATGGGCAATCAGATGAAGAAGAGGAGGCTGAACAGCTT
TTCCGAAGAATAAGAAAAGGAAAAGCTCGGCTACTGCCTGAAGATGAAGACTGCCAAGTA
GAACGTACTTTTGGATTGCTAGGATCTGCAGTTCCAGGGAATATGCTACATCGTCCCCTT
ATAAGGCCAGCGCCTACAGAACAGAAGCAAGAAAACAACACTGGAAGAGCAGCTGTCACA
ATACCTCCACCTCCTTCAAAGCATGTTGAGAGAGAACGGTTCTTCCAAGAAAACAAGTCT
GAGGGTTCTACTCTTTCTGGCCACATGAGAGGCCTGTCCTTACATAGTCGCAACGCCAGC
AGCTCTCGCAGTGGCAGCATTGATTTCAGTGAATAA

Peptide Sequence

PEP ID

XP_016514095.1
PEP Infomation

PREDICTED: TOM1-like protein 2 isoform X1 [Nicotiana tabacum]
Sequence

MAAELVNSATSDKLTEIDWTKNIEICELVAHDHKQARDVVKAIKKRLGSKSPNSQLFSVN
LLEMLINNIGEPVHKQVIDTGILPVLVKIVKKKSDLPVREKIFLLLDAAQTSLGGASGRF
PQYYSAYYELVSAGVQFPQRPLVSSELHAPSNENKHNQRNNDHVSSRCEIKFPQAEPKKF
PDNSILQKAAAALEVLREVLDAVNTQHPEAILFDLLFIQEGAKDEFTLDLVEQCSFQKQR
VMHLAISSRDEKVVSQAVELNEKLDRVLKRHEALLSAWPTSTSNPHDHGQSDEEEEAEQL
FRRIRKGKARLLPEDEDCQVERTFGLLGSAVPGNMLHRPLIRPAPTEQKQENNTGRAAVT
IPPPPSKHVERERFFQENKSEGSTLSGHMRGLSLHSRNASSSRSGSIDFSE

Transcript Sequence

Gene sequence data has not been registered.